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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
3
ChIP-seq
2
Capture-C
Assay category
9
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
2
narrow histone mark
1
broad histone mark
Date released
187
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
8
October, 2019
5
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
179
bed narrowPeak
136
bam
127
bigWig
123
tsv
88
fastq
73
bigBed narrowPeak
64
xls
57
txt
24
tagAlign
14
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
csv
1
vcf
Organism
14
Homo sapiens
Biosample type
9
tissue
3
primary cell
2
in vitro differentiated cells
Organ
6
liver
3
connective tissue
3
epithelium
2
brain
2
pancreas
1
adipose tissue
1
spleen
Project
14
AMP
Genome assembly (visualization)
14
hg19
12
GRCh38
Lab
12
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
14 results
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DNase-seq
ChIP-seq
Capture-C
tissue
body of pancreas
2
brain
2
liver
2
omental fat pad
1
right lobe of liver
1
+ See 1 more…
primary cell
hepatocyte
3
in vitro differentiated cells
adipocyte
1
osteoblast
1
See all biosamples
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