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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ATAC-seq
63
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
75
DNA accessibility
63
DNA binding
Target of assay
63
transcription factor
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
48
May, 2021
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
2
November, 2020
Available data
138
bed narrowPeak
88
fastq
87
bam
83
bigWig
73
bigBed narrowPeak
16
tsv
13
bed bed3+
10
bed bed3
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
7
txt
3
bed bedgraph
1
csv
Organism
138
Homo sapiens
Biosample type
80
tissue
56
cell line
2
in vitro differentiated cells
Organ
51
liver
35
artery
35
blood vessel
35
heart
35
vasculature
27
eye
12
blood
12
bodily fluid
12
epithelium
4
spleen
3
pancreas
2
adipose tissue
2
brain
2
connective tissue
Project
138
AMP
Genome assembly (visualization)
107
GRCh38
101
hg19
Lab
136
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
138 results
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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
35
retina
15
pigmented layer of retina
12
liver
4
2
spleen
3
1
+ See 6 more…
cell line
HepG2
44
GM12878
12
in vitro differentiated cells
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
See all biosamples
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