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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
78
DNA binding
10
DNA accessibility
Target of assay
51
transcription factor
27
histone
27
histone modification
27
narrow histone mark
19
RNA binding protein
15
recombinant protein
5
chromatin remodeller
3
other context
3
other post-translational modification
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
72
December, 2017
65
April, 2019
65
February, 2023
61
November, 2018
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
27
May, 2020
23
February, 2021
16
February, 2018
12
October, 2017
7
July, 2019
6
January, 2019
5
September, 2017
3
December, 2018
3
March, 2020
2
November, 2020
Available data
355
bam
328
bigWig
189
tsv
88
bed narrowPeak
73
fastq
61
bigBed narrowPeak
50
tagAlign
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
88
Homo sapiens
Biosample type
44
cell line
44
tissue
Organ
78
liver
blood
12
bodily fluid
4
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
88
AMP
Genome assembly (visualization)
86
hg19
79
GRCh38
Lab
88
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
blood
BIOSAMPLE
ASSAY
88 results
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ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
44
tissue
liver
31
2
spleen
3
1
body of pancreas
2
brain
2
omental fat pad
1
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