Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
10
ChIP-seq
9
DNase-seq
6
WGBS
1
FAIRE-seq
1
pCHi-C
Assay category
39
Transcription
10
DNA accessibility
10
DNA binding
6
DNA methylation
Target of assay
7
transcription factor
3
control
3
other context
3
other post-translational modification
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
64
bam
61
bigWig
38
tsv
26
fastq
17
bed narrowPeak
17
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
66
Homo sapiens
Biosample type
207
primary cell
132
in vitro differentiated cells
82
cell line
66
tissue
Organ
44
pancreas
9
spleen
7
liver
2
brain
2
heart
1
adipose tissue
1
connective tissue
1
thymus
Project
65
AMP
1
T1D
Genome assembly (visualization)
60
GRCh38
55
hg19
Lab
64
AMP-T2D consortium
2
Kyle Gaulton, UCSD
month_released!
February, 2018
BIOSAMPLE
ASSAY
66 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
pCHi-C
tissue
islet of Langerhans
36
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
1
2
1
+ See 6 more…
See all biosamples
Download