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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
9
DNase-seq
6
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
90
DNA binding
10
DNA accessibility
6
DNA methylation
1
Transcription
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
17
control
13
transcription factor
4
RNA binding protein
3
other context
3
other post-translational modification
Date released
619
February, 2021
411
August, 2017
378
May, 2021
340
May, 2020
284
October, 2019
275
August, 2021
218
June, 2019
200
May, 2022
199
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
53
March, 2020
49
April, 2018
47
September, 2023
45
November, 2019
39
February, 2018
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
5
March, 2019
4
August, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
Available data
105
bam
88
bigWig
82
bed narrowPeak
81
bigBed narrowPeak
27
fastq
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
1
csv
Organism
107
Homo sapiens
Biosample type
106
tissue
cell line
1
primary cell
Organ
57
heart
23
kidney
9
spleen
7
liver
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
107
AMP
Genome assembly (visualization)
86
GRCh38
82
hg19
Lab
107
AMP-T2D consortium
biosample_type!
cell line
BIOSAMPLE
ASSAY
107 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
spleen
6
1
2
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primary cell
pancreatic cell
1
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