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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
26
total RNA-seq
14
ATAC-seq
Assay category
40
DNA binding
26
Transcription
14
DNA accessibility
Target of assay
35
histone
35
histone modification
18
narrow histone mark
17
broad histone mark
3
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
0
November, 2018
Available data
80
bam
80
fastq
77
bigWig
51
bed narrowPeak
28
bigBed narrowPeak
26
tsv
Organism
80
Homo sapiens
Biosample type
61
primary cell
19
in vitro differentiated cells
Organ
116
liver
80
epithelium
79
pancreas
15
blood
15
bodily fluid
13
embryo
9
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
80
AMP
Genome assembly (visualization)
77
GRCh38
77
hg19
Lab
80
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
in vitro differentiated cells
hepatocyte
15
Hepatic endoderm
4
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