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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
1
single cell RNA-seq
Assay category
28
DNA binding
1
Transcription
Target of assay
27
control
1
histone
1
histone modification
narrow histone mark
1
recombinant protein
1
transcription factor
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
111
August, 2017
84
May, 2021
83
October, 2019
81
May, 2020
64
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
21
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
8
February, 2018
8
June, 2019
8
November, 2018
8
October, 2017
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
166
fastq
165
bam
bigWig
130
bed narrowPeak
116
bigBed narrowPeak
19
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
29
Homo sapiens
Biosample type
15
tissue
8
in vitro differentiated cells
4
cell line
1
primary cell
1
stem cell
Organ
14
liver
4
embryo
3
blood
3
bodily fluid
3
epithelium
3
spleen
Project
29
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
29
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
target.investigated_as!
narrow histone mark
files.file_type!
bigWig
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
single cell RNA-seq
tissue
liver
9
right lobe of liver
3
spleen
3
in vitro differentiated cells
Hepatic endoderm
2
pancreatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
+ See 1 more…
cell line
GM12878
3
HepG2
1
primary cell
pancreatic cell
1
stem cell
hESC
1
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