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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
49
single cell RNA-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
169
Transcription
DNA binding
10
DNA accessibility
7
DNA methylation
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
181
bam
181
bigWig
164
tsv
68
fastq
10
bed narrowPeak
10
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
186
Homo sapiens
Biosample type
136
tissue
49
primary cell
1
cell line
Organ
164
pancreas
33
epithelium
4
liver
3
connective tissue
3
spleen
2
brain
1
adipose tissue
Project
186
AMP
Genome assembly (visualization)
180
GRCh38
174
hg19
Lab
186
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
186 results
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Clear Filters
total RNA-seq
single cell RNA-seq
DNase-seq
WGBS
FAIRE-seq
tissue
islet of Langerhans
120
body of pancreas
2
2
pancreas
2
1
spleen
1
2
brain
2
+ See 3 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic cell
4
pancreatic delta cell
4
+ See 10 more…
cell line
HepG2
1
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