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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
49
single cell RNA-seq
10
ChIP-seq
9
DNase-seq
6
WGBS
1
FAIRE-seq
Assay category
169
Transcription
10
DNA accessibility
10
DNA binding
6
DNA methylation
Target of assay
7
transcription factor
3
control
3
other context
3
other post-translational modification
Date released
619
February, 2021
411
August, 2017
378
May, 2021
340
May, 2020
284
October, 2019
275
August, 2021
218
June, 2019
200
May, 2022
199
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
53
March, 2020
49
April, 2018
47
September, 2023
45
November, 2019
39
February, 2018
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
5
March, 2019
4
August, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
Available data
190
bam
187
bigWig
164
tsv
77
fastq
17
bed narrowPeak
17
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
1
csv
Organism
195
Homo sapiens
Biosample type
146
tissue
cell line
49
primary cell
Organ
164
pancreas
33
epithelium
9
spleen
7
liver
3
connective tissue
2
brain
1
adipose tissue
Project
195
AMP
Genome assembly (visualization)
186
GRCh38
181
hg19
Lab
195
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
195 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
tissue
islet of Langerhans
120
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
+ See 3 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic cell
4
pancreatic delta cell
4
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