Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
ATAC-seq
1
Hi-C
1
single cell RNA-seq
Assay category
7
DNA binding
1
3D chromatin structure
1
Transcription
Target of assay
6
control
1
recombinant protein
1
transcription factor
Date released
198
August, 2021
143
February, 2021
139
August, 2017
123
May, 2022
102
February, 2023
90
October, 2019
72
November, 2017
67
May, 2021
56
September, 2020
47
September, 2023
44
March, 2020
29
October, 2018
26
May, 2020
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
10
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
May, 2023
4
November, 2019
4
October, 2022
1
August, 2018
1
August, 2022
1
March, 2019
1
September, 2018
Available data
88
fastq
87
bam
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
bedpe
1
csv
1
hic
Organism
9
Homo sapiens
Biosample type
4
cell line
4
tissue
1
primary cell
Organ
3
blood
3
bodily fluid
3
spleen
1
liver
1
pancreas
Project
9
AMP
Genome assembly (visualization)
1
hg19
Lab
8
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
missing controlled_by
assay_title!
ATAC-seq
files.file_type!
bigWig
BIOSAMPLE
ASSAY
9 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
single cell RNA-seq
cell line
GM12878
3
HepG2
1
tissue
spleen
3
islet of Langerhans
1
primary cell
pancreatic cell
1
Download