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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
20
ATAC-seq
20
total RNA-seq
3
DNase-seq
1
WGBS
Assay category
49
DNA binding
23
DNA accessibility
20
Transcription
1
DNA methylation
Target of assay
49
transcription factor
19
RNA binding protein
16
recombinant protein
5
chromatin remodeller
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
72
bigWig
71
bed narrowPeak
53
bam
53
fastq
51
bigBed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
93
Homo sapiens
Biosample type
47
tissue
46
cell line
Organ
111
pancreas
93
liver
80
epithelium
15
blood
15
bodily fluid
9
spleen
2
brain
2
musculature of body
1
adipose tissue
1
connective tissue
Project
93
AMP
Genome assembly (visualization)
69
hg19
52
GRCh38
Lab
53
AMP-T2D consortium
40
Karen Mohlke, UNC
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
DNase-seq
WGBS
tissue
liver
4
20
20
2
right lobe of liver
1
cell line
HepG2
45
1
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