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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
101
ChIP-seq
7
WGBS
1
single cell RNA-seq
Assay category
101
DNA binding
7
DNA methylation
1
Transcription
Target of assay
77
control
15
histone
15
histone modification
10
narrow histone mark
9
transcription factor
5
broad histone mark
2
RNA binding protein
1
recombinant protein
Date released
399
May, 2021
341
May, 2020
329
February, 2021
318
August, 2021
314
August, 2017
244
October, 2019
204
February, 2023
200
May, 2022
168
July, 2018
94
July, 2019
94
November, 2017
63
March, 2020
60
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
39
February, 2018
23
February, 2020
23
May, 2019
19
April, 2020
16
April, 2019
16
January, 2021
16
October, 2017
15
November, 2018
15
November, 2020
14
May, 2023
13
October, 2018
10
December, 2019
9
January, 2019
8
June, 2019
7
August, 2020
7
January, 2018
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
478
bam
413
bigWig
411
fastq
385
bed narrowPeak
bigBed narrowPeak
78
bed broadPeak
78
tagAlign
72
bigBed broadPeak
8
bed bed3+
7
bed bedMethyl
7
bigBed bedMethyl
3
tar
1
csv
Organism
109
Homo sapiens
Biosample type
71
cell line
34
tissue
4
primary cell
Organ
68
liver
28
brain
5
spleen
4
pancreas
3
blood
3
bodily fluid
2
epithelium
2
vasculature
1
blood vessel
Project
109
AMP
Genome assembly (visualization)
23
hg19
7
GRCh38
Lab
109
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
adipose tissue
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
109 results
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Clear Filters
ChIP-seq
WGBS
single cell RNA-seq
cell line
HepG2
67
1
GM12878
3
tissue
cingulate gyrus
8
layer of hippocampus
6
spleen
3
2
substantia nigra
4
caudate nucleus
3
+ See 4 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
pancreatic cell
1
See all biosamples
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