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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
8
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
64
DNA binding
9
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
control
3
other context
3
other post-translational modification
Date released
390
May, 2021
335
November, 2017
326
February, 2021
318
May, 2020
310
August, 2017
306
August, 2021
274
October, 2019
209
June, 2019
204
February, 2023
200
May, 2022
168
July, 2018
97
May, 2019
93
July, 2019
81
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
63
March, 2020
59
September, 2020
58
November, 2019
49
April, 2018
47
September, 2023
42
October, 2018
31
December, 2018
31
February, 2018
26
January, 2019
23
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
14
May, 2023
11
November, 2020
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
5
September, 2017
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
81
fastq
80
bam
79
bigWig
72
bed narrowPeak
72
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
81
Homo sapiens
Biosample type
58
cell line
22
tissue
1
primary cell
Organ
53
liver
12
blood
12
bodily fluid
7
pancreas
6
spleen
2
brain
adipose tissue
1
connective tissue
Project
81
AMP
Genome assembly (visualization)
78
GRCh38
70
hg19
Lab
81
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
adipose tissue
target.investigated_as!
control
BIOSAMPLE
ASSAY
81 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
1
GM12878
12
tissue
liver
4
2
spleen
3
1
2
body of pancreas
2
2
pancreas
2
1
brain
2
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primary cell
pancreatic cell
1
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