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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
7
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
55
DNA binding
8
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
52
transcription factor
19
RNA binding protein
16
recombinant protein
5
chromatin remodeller
3
control
3
other context
3
other post-translational modification
Date released
715
February, 2021
411
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
315
November, 2017
228
October, 2019
204
February, 2023
200
May, 2022
188
June, 2019
168
July, 2018
94
December, 2017
92
May, 2019
90
July, 2019
80
April, 2019
76
October, 2018
73
September, 2018
71
November, 2018
62
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
19
April, 2020
16
November, 2020
15
May, 2023
13
February, 2020
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
7
October, 2017
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
71
fastq
70
bam
66
bigWig
59
bed narrowPeak
59
bigBed narrowPeak
7
bed bed3+
7
bed bedMethyl
7
bed broadPeak
7
bigBed bedMethyl
7
bigBed broadPeak
1
csv
Organism
71
Homo sapiens
Biosample type
46
cell line
24
tissue
1
primary cell
Organ
53
liver
15
blood
bodily fluid
9
spleen
7
pancreas
brain
1
adipose tissue
1
connective tissue
Project
71
AMP
Genome assembly (visualization)
65
GRCh38
57
hg19
Lab
71
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
brain
bodily fluid
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
1
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
omental fat pad
1
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primary cell
pancreatic cell
1
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