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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
7
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
64
DNA binding
8
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
control
3
other context
3
other post-translational modification
Date released
712
February, 2021
390
May, 2021
361
August, 2017
318
May, 2020
307
August, 2021
259
November, 2017
204
February, 2023
200
May, 2022
196
October, 2019
180
June, 2019
168
July, 2018
90
July, 2019
80
November, 2018
73
December, 2017
73
September, 2018
72
May, 2019
66
April, 2019
62
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
31
December, 2018
31
February, 2018
26
January, 2019
19
April, 2020
16
January, 2021
15
May, 2023
13
February, 2020
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
7
October, 2017
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
80
fastq
79
bam
78
bigWig
71
bed narrowPeak
71
bigBed narrowPeak
7
bed bed3+
7
bed bedMethyl
7
bed broadPeak
7
bigBed bedMethyl
7
bigBed broadPeak
1
csv
Organism
80
Homo sapiens
Biosample type
58
cell line
21
tissue
1
primary cell
Organ
53
liver
12
blood
12
bodily fluid
7
pancreas
6
spleen
brain
1
adipose tissue
1
connective tissue
Project
80
AMP
Genome assembly (visualization)
77
GRCh38
69
hg19
Lab
80
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
brain
target.investigated_as!
control
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
1
GM12878
12
tissue
liver
4
2
spleen
3
1
2
body of pancreas
2
2
pancreas
2
1
omental fat pad
1
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primary cell
pancreatic cell
1
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