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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
70
DNA binding
7
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
395
May, 2021
341
May, 2020
311
August, 2021
302
October, 2019
264
August, 2017
259
February, 2021
199
May, 2022
191
February, 2023
166
July, 2018
120
May, 2019
87
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
73
September, 2018
62
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
19
June, 2019
16
January, 2021
14
May, 2023
10
December, 2019
10
November, 2020
9
September, 2017
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
87
fastq
86
bam
79
bigWig
72
bed narrowPeak
72
bigBed narrowPeak
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
79
Homo sapiens
Biosample type
61
cell line
17
tissue
1
primary cell
Organ
50
liver
15
blood
15
bodily fluid
8
spleen
5
pancreas
Project
79
AMP
Genome assembly (visualization)
70
GRCh38
62
hg19
Lab
79
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
connective tissue
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
79 results
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Clear Filters
ChIP-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
2
liver
4
pancreas
2
1
body of pancreas
2
primary cell
pancreatic cell
1
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