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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
single cell RNA-seq
21
ChIP-seq
6
DNase-seq
6
WGBS
6
total RNA-seq
1
FAIRE-seq
Assay category
50
Transcription
21
DNA binding
7
DNA accessibility
6
DNA methylation
Target of assay
15
transcription factor
6
control
3
other context
3
other post-translational modification
2
RNA binding protein
2
chromatin remodeller
Date released
712
February, 2021
399
May, 2021
357
August, 2017
307
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
83
bam
79
fastq
77
bigWig
49
tsv
22
bed narrowPeak
22
bigBed narrowPeak
6
bed bed3+
6
bed bedMethyl
6
bed broadPeak
6
bigBed bedMethyl
6
bigBed broadPeak
1
csv
Organism
84
Homo sapiens
Biosample type
44
primary cell
25
tissue
15
cell line
Organ
liver
46
pancreas
33
epithelium
15
blood
15
bodily fluid
9
spleen
3
connective tissue
2
brain
1
adipose tissue
Project
84
AMP
Genome assembly (visualization)
76
GRCh38
71
hg19
Lab
84
AMP-T2D consortium
organ_slims!
liver
BIOSAMPLE
ASSAY
84 results
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Clear Filters
single cell RNA-seq
ChIP-seq
DNase-seq
WGBS
total RNA-seq
FAIRE-seq
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
+ See 5 more…
tissue
spleen
6
1
2
islet of Langerhans
6
body of pancreas
2
2
pancreas
2
1
brain
2
+ See 1 more…
cell line
GM12878
15
See all biosamples
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