Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
10
MeRIP-seq
7
DNase-seq
6
WGBS
4
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
21
DNA binding
9
DNA accessibility
6
DNA methylation
5
Transcription
Target of assay
15
transcription factor
11
control
5
nucleotide modification
3
other context
3
other post-translational modification
2
RNA binding protein
2
chromatin remodeller
Date released
712
February, 2021
399
May, 2021
357
August, 2017
307
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
40
bam
35
fastq
33
bigWig
24
bed narrowPeak
23
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
4
tsv
1
csv
Organism
51
Homo sapiens
Biosample type
23
tissue
21
cell line
7
primary cell
Organ
liver
17
pancreas
15
blood
15
bodily fluid
9
spleen
7
connective tissue
6
epithelium
2
brain
1
adipose tissue
Project
51
AMP
Genome assembly (visualization)
33
GRCh38
28
hg19
Lab
41
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
51 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
DNase-seq
WGBS
total RNA-seq
ATAC-seq
FAIRE-seq
single cell RNA-seq
tissue
spleen
6
1
2
body of pancreas
2
2
islet of Langerhans
4
pancreas
2
1
brain
2
+ See 1 more…
cell line
GM12878
15
EndoC_BH1
6
primary cell
osteoblast
1
4
1
pancreatic cell
1
See all biosamples
Download