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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
48
DNA binding
10
DNA accessibility
Target of assay
63
transcription factor
21
RNA binding protein
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
246
November, 2017
210
June, 2019
97
May, 2019
70
October, 2019
64
April, 2019
58
November, 2018
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
72
fastq
71
bam
65
bigWig
58
bed narrowPeak
58
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
58
Homo sapiens
Biosample type
41
cell line
17
tissue
Organ
36
liver
12
blood
12
bodily fluid
4
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
58
AMP
Genome assembly (visualization)
58
hg19
57
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
recombinant protein
month_released!
September, 2018
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
29
GM12878
12
tissue
liver
4
2
spleen
3
1
body of pancreas
2
brain
2
omental fat pad
1
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