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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
6
DNase-seq
3
WGBS
1
single cell RNA-seq
Assay category
54
DNA binding
6
DNA accessibility
3
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
341
May, 2020
340
November, 2017
336
May, 2021
310
August, 2021
285
October, 2019
228
February, 2021
196
June, 2019
135
February, 2023
118
May, 2019
98
August, 2017
96
May, 2022
94
December, 2017
84
July, 2019
80
April, 2019
64
November, 2018
48
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
22
February, 2020
19
April, 2020
17
October, 2017
14
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2021
7
January, 2018
5
March, 2023
5
November, 2019
2
June, 2018
1
October, 2022
1
September, 2018
Available data
64
fastq
63
bam
57
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
csv
Organism
64
Homo sapiens
Biosample type
45
cell line
18
tissue
1
primary cell
Organ
37
liver
15
blood
15
bodily fluid
9
spleen
pancreas
2
brain
1
adipose tissue
connective tissue
Project
64
AMP
Genome assembly (visualization)
57
GRCh38
54
hg19
Lab
64
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
recombinant protein
organ_slims!
connective tissue
pancreas
BIOSAMPLE
ASSAY
64 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
single cell RNA-seq
cell line
HepG2
29
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
brain
2
right lobe of liver
1
primary cell
pancreatic cell
1
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