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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
total RNA-seq
13
ChIP-seq
10
MeRIP-seq
2
Hi-C
Assay category
DNA accessibility
24
Transcription
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
7
control
6
broad histone mark
5
nucleotide modification
4
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
37
bam
35
bigWig
24
tsv
11
bed narrowPeak
2
bedpe bed3+
2
hic
Organism
49
Homo sapiens
Biosample type
24
tissue
21
cell line
4
primary cell
Organ
45
pancreas
21
epithelium
4
connective tissue
Project
49
AMP
Genome assembly (visualization)
37
hg19
35
GRCh38
Lab
39
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
21
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
49 results
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Clear Filters
total RNA-seq
ChIP-seq
MeRIP-seq
Hi-C
tissue
islet of Langerhans
19
4
1
cell line
EndoC_BH1
1
13
6
1
primary cell
osteoblast
4
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