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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
22
total RNA-seq
2
Hi-C
Assay category
87
DNA binding
DNA accessibility
22
Transcription
2
3D chromatin structure
Target of assay
40
histone
40
histone modification
31
control
25
broad histone mark
16
transcription factor
15
narrow histone mark
12
RNA binding protein
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
109
bam
78
bigWig
60
fastq
56
bed narrowPeak
45
bigBed narrowPeak
22
tsv
2
bedpe bed3+
2
hic
Organism
111
Homo sapiens
Biosample type
94
tissue
15
cell line
2
primary cell
Organ
88
pancreas
23
adipose tissue
23
connective tissue
17
epithelium
Project
111
AMP
Genome assembly (visualization)
80
hg19
78
GRCh38
Lab
111
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
111 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
tissue
body of pancreas
33
islet of Langerhans
19
1
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 1 more…
cell line
EndoC_BH1
13
1
1
primary cell
pancreatic acinar cell
2
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