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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
26
ATAC-seq
2
Hi-C
Assay category
38
DNA binding
26
DNA accessibility
Transcription
2
3D chromatin structure
Target of assay
17
histone
17
histone modification
15
transcription factor
10
broad histone mark
7
RNA binding protein
7
narrow histone mark
6
chromatin remodeller
6
control
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
64
bam
58
bed narrowPeak
32
bigWig
25
fastq
21
bigBed narrowPeak
2
bedpe bed3+
2
hic
Organism
66
Homo sapiens
Biosample type
33
cell line
28
tissue
5
in vitro differentiated cells
Organ
35
pancreas
18
blood
18
bodily fluid
15
epithelium
7
spleen
1
adipose tissue
1
connective tissue
Project
66
AMP
Genome assembly (visualization)
60
hg19
58
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
cell line
GM12878
18
EndoC_BH1
13
1
1
tissue
islet of Langerhans
19
1
spleen
7
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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