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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
35
total RNA-seq
27
ChIP-seq
Assay category
100
DNA accessibility
35
Transcription
27
DNA binding
Target of assay
26
histone
26
histone modification
13
broad histone mark
13
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
127
bed narrowPeak
98
bam
64
xls
62
bigWig
35
tsv
16
tagAlign
3
bed bed3+
Organism
162
Homo sapiens
Biosample type
103
tissue
35
in vitro differentiated cells
21
cell line
3
primary cell
Organ
64
kidney
51
pancreas
16
epithelium
8
embryo
3
liver
1
adipose tissue
1
connective tissue
Project
162
AMP
Genome assembly (visualization)
162
GRCh38
119
hg19
Lab
98
AMP-T2D consortium
64
Katalin Susztak, Upenn
Audit category:
19
inconsistent ontology term
BIOSAMPLE
ASSAY
162 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
tissue
kidney
64
islet of Langerhans
19
19
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
neural progenitor cell
10
7
13
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cell line
EndoC_BH1
1
1
11
H1-hESC
8
primary cell
hepatocyte
3
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