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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
21
total RNA-seq
19
ATAC-seq
1
Hi-C
Assay category
74
DNA binding
21
Transcription
19
DNA accessibility
1
3D chromatin structure
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
587
February, 2021
411
August, 2017
406
November, 2017
333
May, 2020
316
August, 2021
309
May, 2021
291
October, 2019
200
May, 2022
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
47
March, 2020
47
September, 2023
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
114
bam
66
bigWig
64
bed narrowPeak
60
fastq
45
bigBed narrowPeak
21
tsv
1
bedpe bed3+
1
hic
Organism
115
Homo sapiens
Biosample type
113
tissue
2
primary cell
Organ
92
pancreas
23
adipose tissue
23
connective tissue
2
epithelium
Project
115
AMP
Genome assembly (visualization)
86
hg19
85
GRCh38
Lab
115
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
115 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
tissue
islet of Langerhans
19
19
1
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 1 more…
primary cell
pancreatic acinar cell
2
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