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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
7
WGBS
6
RRBS
2
Hi-C
1
DNase-seq
Assay category
115
DNA binding
13
DNA methylation
2
3D chromatin structure
1
DNA accessibility
Target of assay
96
histone
96
histone modification
60
broad histone mark
36
narrow histone mark
19
control
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
303
bigWig
287
fastq
179
bed narrowPeak
109
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bedpe bed3+
2
hic
Organism
131
Homo sapiens
Biosample type
115
tissue
14
in vitro differentiated cells
1
cell line
1
primary cell
Organ
54
connective tissue
40
adipose tissue
28
liver
26
musculature of body
22
pancreas
1
epithelium
Project
131
AMP
Genome assembly (visualization)
26
hg19
Lab
131
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
131 results
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Clear Filters
ChIP-seq
WGBS
RRBS
Hi-C
DNase-seq
tissue
subcutaneous abdominal adipose tissue
36
3
liver
23
3
1
skeletal muscle tissue
22
4
islet of Langerhans
20
1
adipose tissue
1
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in vitro differentiated cells
adipocyte
14
cell line
EndoC_BH1
1
primary cell
skeletal muscle myoblast
1
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