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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
2
Hi-C
Assay category
56
Transcription
3
DNA accessibility
2
3D chromatin structure
Date released
270
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
41
fastq
37
bed narrowPeak
34
bigWig
20
tsv
19
zippedFastqFolder
2
bedpe bed3+
2
hic
Organism
61
Homo sapiens
Biosample type
59
primary cell
1
cell line
1
tissue
Organ
21
pancreas
20
epithelium
Project
59
HPAP
2
AMP
Genome assembly (visualization)
3
GRCh38
2
hg19
Lab
59
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
61 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
Hi-C
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
cell line
EndoC_BH1
1
tissue
islet of Langerhans
1
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