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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
11
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
11
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
control
1
RNA binding protein
1
transcription factor
Date released
335
November, 2017
272
August, 2017
259
October, 2019
217
May, 2021
210
June, 2019
200
May, 2022
189
February, 2023
184
August, 2021
153
February, 2021
129
May, 2020
97
May, 2019
82
November, 2018
73
December, 2017
66
April, 2019
59
September, 2020
47
September, 2018
47
September, 2023
45
October, 2018
43
July, 2019
39
November, 2019
31
December, 2018
21
January, 2019
20
October, 2017
19
April, 2020
19
March, 2020
16
February, 2018
16
January, 2021
15
May, 2023
8
January, 2018
7
August, 2020
7
November, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
57
bam
37
bed narrowPeak
31
bigWig
tsv
2
bedpe bed3+
2
hic
Organism
39
Homo sapiens
Biosample type
21
tissue
13
cell line
5
in vitro differentiated cells
Organ
33
pancreas
13
epithelium
1
adipose tissue
1
connective tissue
Project
39
AMP
Genome assembly (visualization)
39
hg19
37
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
files.file_type!
tsv
target.investigated_as!
control
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
11
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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