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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ATAC-seq
20
total RNA-seq
13
ChIP-seq
3
single cell RNA-seq
Assay category
23
Transcription
21
DNA accessibility
13
DNA binding
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
550
February, 2021
392
November, 2017
283
May, 2020
246
October, 2019
228
August, 2017
218
June, 2019
192
May, 2021
164
July, 2018
120
May, 2019
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
54
November, 2019
51
December, 2017
49
April, 2018
34
December, 2018
30
January, 2019
24
May, 2022
15
October, 2017
14
March, 2020
12
August, 2021
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
57
bam
34
bigWig
32
bed narrowPeak
23
tsv
3
fastq
2
bedpe bed3+
2
hic
Organism
57
Homo sapiens
Biosample type
39
tissue
15
cell line
in vitro differentiated cells
3
primary cell
Organ
54
pancreas
16
epithelium
1
adipose tissue
1
connective tissue
Project
57
AMP
Genome assembly (visualization)
55
GRCh38
55
hg19
Lab
57
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
57 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
single cell RNA-seq
tissue
islet of Langerhans
19
19
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
13
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
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