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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
6
ATAC-seq
2
Hi-C
1
total RNA-seq
Assay category
40
DNA binding
6
DNA accessibility
2
3D chromatin structure
1
Transcription
Target of assay
26
transcription factor
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
3
RNA binding protein
2
chromatin remodeller
2
control
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
47
bam
44
bed narrowPeak
39
bigWig
28
fastq
27
bigBed narrowPeak
1
bedpe bed3+
1
hic
1
tsv
Organism
49
Homo sapiens
Biosample type
tissue
44
cell line
5
in vitro differentiated cells
Organ
27
blood
27
bodily fluid
16
epithelium
16
pancreas
1
liver
Project
49
AMP
Genome assembly (visualization)
46
hg19
45
GRCh38
Lab
49
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
1
inconsistent control
month_released!
August, 2020
biosample_type!
tissue
BIOSAMPLE
ASSAY
49 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
cell line
GM12878
27
EndoC_BH1
13
1
1
1
HepG2
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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