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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
29
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
16
control
11
histone
11
histone modification
6
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
715
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
138
bam
102
bed narrowPeak
96
bigWig
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
77
Homo sapiens
Biosample type
56
tissue
16
cell line
5
in vitro differentiated cells
Organ
55
pancreas
16
epithelium
11
heart
5
kidney
1
adipose tissue
1
connective tissue
Project
77
AMP
Genome assembly (visualization)
60
hg19
57
GRCh38
Lab
77
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
heart left ventricle
7
kidney
5
heart
2
heart right ventricle
2
+ See 1 more…
cell line
EndoC_BH1
13
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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