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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
20
ATAC-seq
19
total RNA-seq
1
Hi-C
Assay category
128
DNA binding
20
DNA accessibility
19
Transcription
1
3D chromatin structure
Target of assay
65
histone
65
histone modification
40
broad histone mark
37
transcription factor
26
control
25
narrow histone mark
6
RNA binding protein
2
chromatin remodeller
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
166
bam
121
bed narrowPeak
120
bigWig
100
bigBed narrowPeak
48
fastq
19
tsv
1
bedpe bed3+
1
hic
Organism
168
Homo sapiens
Biosample type
168
tissue
48
in vitro differentiated cells
16
cell line
3
stem cell
Organ
57
heart
48
liver
39
pancreas
23
kidney
1
adipose tissue
1
connective tissue
Project
168
AMP
Genome assembly (visualization)
141
hg19
139
GRCh38
Lab
168
AMP-T2D consortium
Audit category:
27
inconsistent control
1
inconsistent ontology term
BIOSAMPLE
ASSAY
168 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
liver
38
heart left ventricle
35
kidney
23
heart right ventricle
13
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