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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
20
ATAC-seq
19
total RNA-seq
1
Hi-C
Assay category
46
DNA binding
20
DNA accessibility
19
Transcription
1
3D chromatin structure
Target of assay
31
transcription factor
12
control
5
histone
5
histone modification
3
broad histone mark
RNA binding protein
2
chromatin remodeller
2
narrow histone mark
Date released
545
February, 2021
282
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
111
May, 2019
95
February, 2023
82
November, 2017
77
July, 2019
76
April, 2019
66
May, 2022
63
October, 2018
47
September, 2023
46
December, 2017
40
March, 2020
40
May, 2021
40
November, 2019
35
May, 2024
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
85
bam
54
bed narrowPeak
53
bigWig
46
fastq
34
bigBed narrowPeak
19
tsv
1
bedpe bed3+
1
hic
Organism
86
Homo sapiens
Biosample type
86
tissue
46
in vitro differentiated cells
15
cell line
3
stem cell
Organ
46
liver
39
pancreas
1
adipose tissue
1
connective tissue
Project
86
AMP
Genome assembly (visualization)
74
hg19
73
GRCh38
Lab
86
AMP-T2D consortium
Audit category:
27
inconsistent control
1
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
liver
37
right lobe of liver
9
adipose tissue(adipose white tissue)
1
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