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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
20
total RNA-seq
Assay category
83
DNA binding
20
Transcription
Target of assay
43
transcription factor
40
histone
40
histone modification
21
broad histone mark
19
narrow histone mark
5
RNA binding protein
3
chromatin remodeller
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
153
bam
109
bed narrowPeak
103
bigWig
94
fastq
50
bigBed narrowPeak
20
tsv
15
bed bed3+
2
bedpe bed3+
2
hic
Organism
103
Homo sapiens
Biosample type
55
tissue
34
in vitro differentiated cells
12
cell line
2
stem cell
Organ
50
liver
31
pancreas
28
epithelium
8
embryo
Project
103
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
103
AMP-T2D consortium
Audit category:
27
inconsistent control
14
inconsistent ontology term
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
103 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
29
islet of Langerhans
19
right lobe of liver
7
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
6
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
+ See 1 more…
cell line
EndoC_BH1
11
1
stem cell
hESC
2
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