Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
16
total RNA-seq
6
ATAC-seq
1
Hi-C
Assay category
37
DNA binding
16
Transcription
6
DNA accessibility
1
3D chromatin structure
Target of assay
26
histone
26
histone modification
14
broad histone mark
12
narrow histone mark
10
control
1
RNA binding protein
1
transcription factor
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
59
bam
43
bigWig
39
fastq
33
bed narrowPeak
16
tsv
1
bedpe bed3+
1
hic
Organism
60
Homo sapiens
Biosample type
44
in vitro differentiated cells
tissue
16
cell line
Organ
16
epithelium
16
pancreas
13
embryo
Project
60
AMP
Genome assembly (visualization)
50
hg19
49
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
Audit category:
2
inconsistent control read length
biosample_type!
tissue
BIOSAMPLE
ASSAY
60 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
in vitro differentiated cells
pancreatic endoderm
9
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
+ See 3 more…
cell line
EndoC_BH1
13
1
1
1
See all biosamples
Download