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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ATAC-seq
20
total RNA-seq
3
single cell RNA-seq
1
Hi-C
Assay category
36
DNA accessibility
23
Transcription
1
3D chromatin structure
Date released
571
February, 2021
352
August, 2017
271
August, 2021
250
October, 2019
193
May, 2020
172
May, 2021
163
June, 2019
120
July, 2018
115
May, 2019
111
February, 2023
91
December, 2017
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
39
February, 2018
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
January, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
November, 2020
1
August, 2018
1
August, 2022
Available data
44
bam
25
bed narrowPeak
19
bigWig
19
tsv
1
bedpe bed3+
1
hic
Organism
60
Homo sapiens
Biosample type
55
tissue
16
cell line
5
in vitro differentiated cells
Organ
39
pancreas
14
kidney
2
adipose tissue
2
connective tissue
Project
60
AMP
Genome assembly (visualization)
56
GRCh38
46
hg19
Lab
46
AMP-T2D consortium
14
Katalin Susztak, Upenn
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ATAC-seq
total RNA-seq
single cell RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
kidney
11
3
adipose tissue
1
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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