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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
20
ATAC-seq
19
total RNA-seq
1
Hi-C
Assay category
82
DNA binding
20
DNA accessibility
19
Transcription
1
3D chromatin structure
Target of assay
70
histone
70
histone modification
42
broad histone mark
28
narrow histone mark
12
control
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
108
bam
78
bed narrowPeak
76
bigWig
66
tagAlign
57
bigBed narrowPeak
19
tsv
6
bed broadPeak
1
bedpe bed3+
1
hic
Organism
122
Homo sapiens
Biosample type
331
cell line
122
tissue
9
primary cell
5
in vitro differentiated cells
Organ
82
brain
39
pancreas
1
adipose tissue
1
connective tissue
Project
122
AMP
Genome assembly (visualization)
96
GRCh38
46
hg19
Lab
122
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
May, 2023
BIOSAMPLE
ASSAY
122 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
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