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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
245
ChIP-seq
Assay category
245
DNA binding
Target of assay
245
transcription factor
98
histone
98
histone modification
73
control
66
recombinant protein
56
broad histone mark
42
narrow histone mark
38
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
Available data
244
bam
244
fastq
241
bigWig
237
bed narrowPeak
236
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
245
Homo sapiens
Biosample type
242
cell line
3
primary cell
Organ
241
liver
3
brain
3
epithelium
2
vasculature
1
blood vessel
1
pancreas
Project
245
AMP
Genome assembly (visualization)
239
hg19
205
GRCh38
Lab
245
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
245 results
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ChIP-seq
cell line
HepG2
241
EndoC_BH1
1
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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