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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
20
total RNA-seq
11
ChIP-seq
2
Hi-C
Assay category
25
DNA accessibility
20
Transcription
11
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
control
1
RNA binding protein
1
transcription factor
Date released
390
May, 2021
335
November, 2017
326
February, 2021
318
May, 2020
310
August, 2017
306
August, 2021
274
October, 2019
209
June, 2019
204
February, 2023
200
May, 2022
168
July, 2018
97
May, 2019
93
July, 2019
81
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
63
March, 2020
59
September, 2020
58
November, 2019
49
April, 2018
47
September, 2023
42
October, 2018
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
23
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
14
May, 2023
11
November, 2020
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
5
September, 2017
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
56
bam
36
bed narrowPeak
31
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
58
Homo sapiens
Biosample type
39
tissue
14
cell line
5
in vitro differentiated cells
Organ
53
pancreas
14
epithelium
adipose tissue
1
connective tissue
Project
58
AMP
Genome assembly (visualization)
58
hg19
56
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
organ_slims!
adipose tissue
target.investigated_as!
control
month_released!
October, 2022
BIOSAMPLE
ASSAY
58 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
cell line
EndoC_BH1
1
1
11
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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