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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
346
ChIP-seq
Assay category
346
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
245
transcription factor
98
histone
98
histone modification
control
66
recombinant protein
56
broad histone mark
42
narrow histone mark
38
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
335
November, 2017
246
August, 2017
203
October, 2019
156
May, 2021
97
May, 2019
73
December, 2017
66
April, 2019
64
November, 2018
45
October, 2018
40
May, 2024
32
September, 2018
31
August, 2021
30
December, 2018
27
May, 2020
23
June, 2019
21
January, 2019
16
February, 2018
12
October, 2017
11
November, 2019
5
February, 2021
3
March, 2020
Available data
332
bam
329
bigWig
324
bed narrowPeak
312
bigBed narrowPeak
265
fastq
70
bed broadPeak
67
tagAlign
64
bigBed broadPeak
3
tar
Organism
346
Homo sapiens
Biosample type
270
cell line
70
tissue
6
primary cell
Organ
259
liver
76
brain
15
epithelium
11
pancreas
4
vasculature
2
blood vessel
Project
346
AMP
Genome assembly (visualization)
291
GRCh38
276
hg19
Lab
346
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
control
BIOSAMPLE
ASSAY
346 results
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Clear Filters
ChIP-seq
cell line
HepG2
259
EndoC_BH1
11
tissue
layer of hippocampus
19
caudate nucleus
13
substantia nigra
13
cingulate gyrus
12
middle frontal area 46
12
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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