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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
4
MeRIP-seq
1
ATAC-seq
Assay category
56
Transcription
1
DNA accessibility
Target of assay
2
control
2
nucleotide modification
Date released
250
August, 2021
196
February, 2023
180
May, 2022
151
February, 2021
139
August, 2017
97
October, 2019
80
May, 2020
80
May, 2021
56
September, 2020
47
September, 2023
40
March, 2020
29
October, 2018
26
November, 2019
25
February, 2020
25
November, 2017
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
9
October, 2017
8
February, 2018
8
June, 2019
6
September, 2017
5
December, 2019
5
March, 2019
5
November, 2020
4
December, 2018
4
July, 2018
4
November, 2018
3
March, 2023
3
October, 2022
1
August, 2018
1
August, 2022
1
January, 2019
1
September, 2018
Available data
41
fastq
19
zippedFastqFolder
bigWig
6
bam
4
tsv
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
61
Homo sapiens
Biosample type
57
primary cell
cell line
4
tissue
Organ
20
pancreas
16
epithelium
1
connective tissue
Project
56
HPAP
5
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
56
Klaus Kaestner, Upenn
4
Rohit N. Kulkarni, M.D., Ph.D.
1
AMP-T2D consortium
biosample_type!
cell line
files.file_type!
bigWig
BIOSAMPLE
ASSAY
61 results
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single cell RNA-seq
total RNA-seq
MeRIP-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
osteoblast
1
pancreatic beta cell
1
tissue
islet of Langerhans
4
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