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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ATAC-seq
4
MeRIP-seq
4
total RNA-seq
1
DNase-seq
1
Hi-C
Assay category
6
DNA accessibility
4
Transcription
1
3D chromatin structure
Target of assay
2
control
2
nucleotide modification
Date released
619
February, 2021
August, 2017
378
May, 2021
340
May, 2020
284
October, 2019
275
August, 2021
218
June, 2019
200
May, 2022
199
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
53
March, 2020
49
April, 2018
47
September, 2023
45
November, 2019
40
May, 2024
39
February, 2018
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
5
March, 2019
4
August, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
Available data
7
bam
5
bigWig
4
tsv
2
bed broadPeak
2
bed narrowPeak
1
bed bed3+
1
bedpe
1
bigBed broadPeak
1
bigBed narrowPeak
1
fastq
1
hic
Organism
15
Homo sapiens
Biosample type
9
tissue
cell line
6
primary cell
Organ
9
pancreas
6
connective tissue
Project
15
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
6
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
biosample_type!
cell line
month_released!
August, 2017
BIOSAMPLE
ASSAY
15 results
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ATAC-seq
MeRIP-seq
total RNA-seq
DNase-seq
Hi-C
tissue
islet of Langerhans
4
4
1
primary cell
osteoblast
1
4
1
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