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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
20
total RNA-seq
4
ATAC-seq
4
MeRIP-seq
1
DNase-seq
Assay category
60
Transcription
5
DNA accessibility
Target of assay
2
control
2
nucleotide modification
Date released
619
February, 2021
411
August, 2017
378
May, 2021
340
May, 2020
284
October, 2019
275
August, 2021
218
June, 2019
200
May, 2022
199
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
53
March, 2020
49
April, 2018
47
September, 2023
45
November, 2019
40
May, 2024
39
February, 2018
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
5
March, 2019
4
August, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
Available data
41
fastq
19
zippedFastqFolder
8
bigWig
6
bam
4
tsv
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
69
Homo sapiens
Biosample type
65
primary cell
cell line
4
tissue
Organ
23
pancreas
19
epithelium
6
connective tissue
Project
59
HPAP
10
AMP
Genome assembly (visualization)
9
GRCh38
6
hg19
Lab
59
Klaus Kaestner, Upenn
6
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
biosample_type!
cell line
BIOSAMPLE
ASSAY
69 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
MeRIP-seq
DNase-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
osteoblast
4
1
1
pancreatic beta cell
1
1
tissue
islet of Langerhans
4
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