Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
20
total RNA-seq
10
MeRIP-seq
4
ATAC-seq
Assay category
60
Transcription
4
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
713
February, 2021
406
November, 2017
397
May, 2021
378
August, 2017
341
May, 2020
314
August, 2021
306
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
104
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
41
fastq
19
zippedFastqFolder
8
bigWig
6
bam
4
tsv
2
bed narrowPeak
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
74
Homo sapiens
Biosample type
64
primary cell
6
cell line
4
tissue
Organ
29
pancreas
25
epithelium
5
connective tissue
Project
59
HPAP
15
AMP
Genome assembly (visualization)
8
GRCh38
5
hg19
Lab
59
Klaus Kaestner, Upenn
10
Rohit N. Kulkarni, M.D., Ph.D.
5
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
74 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
MeRIP-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
osteoblast
4
1
pancreatic beta cell
1
1
cell line
EndoC_BH1
6
tissue
islet of Langerhans
4
Download