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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
single cell RNA-seq
10
MeRIP-seq
10
total RNA-seq
ATAC-seq
1
DNase-seq
Assay category
53
Transcription
1
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
693
February, 2021
406
August, 2017
406
November, 2017
365
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
102
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
54
bam
54
bigWig
53
tsv
44
fastq
1
bed bed3+
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
64
Homo sapiens
Biosample type
48
primary cell
10
tissue
6
cell line
Organ
49
pancreas
39
epithelium
7
connective tissue
Project
64
AMP
Genome assembly (visualization)
54
GRCh38
54
hg19
Lab
54
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
month_released!
June, 2019
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
64 results
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Clear Filters
single cell RNA-seq
MeRIP-seq
total RNA-seq
DNase-seq
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
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tissue
islet of Langerhans
4
6
cell line
EndoC_BH1
6
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