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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
1
DNase-seq
Assay category
33
DNA binding
1
DNA accessibility
Target of assay
19
transcription factor
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
2
RNA binding protein
2
control
Date released
187
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
8
October, 2019
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
288
bam
287
fastq
277
bigWig
144
bed narrowPeak
93
tsv
85
tagAlign
43
bigBed narrowPeak
42
bed broadPeak
34
bed bed3+
16
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
34
Homo sapiens
Biosample type
26
tissue
7
in vitro differentiated cells
1
primary cell
Organ
19
pancreas
12
connective tissue
4
adipose tissue
3
liver
Project
34
AMP
Genome assembly (visualization)
34
GRCh38
34
hg19
Lab
34
AMP-T2D consortium
Audit category:
14
missing controlled_by
Audit category:
4
inconsistent control read length
month_released!
August, 2021
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ChIP-seq
DNase-seq
tissue
islet of Langerhans
19
white adipose tissue
4
liver
3
in vitro differentiated cells
adipocyte
7
primary cell
osteoblast
1
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