Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
5
total RNA-seq
4
ATAC-seq
3
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
5
Transcription
4
DNA accessibility
3
DNA binding
1
3D chromatin structure
Target of assay
5
control
5
nucleotide modification
3
histone
3
histone modification
3
narrow histone mark
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
10
bigWig
6
bam
6
tsv
3
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
24
Homo sapiens
Biosample type
13
tissue
11
cell line
Organ
24
pancreas
12
epithelium
8
connective tissue
7
heart
5
musculature of body
4
blood vessel
4
vasculature
3
liver
2
brain
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
17
AMP
7
T1D
Genome assembly (visualization)
11
hg19
6
GRCh38
Lab
14
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
11
inconsistent ontology term
BIOSAMPLE
ASSAY
24 results
search-icon
table-tab-icon
Clear Filters
MeRIP-seq
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
4
2
2
2
pancreas
1
1
1
cell line
EndoC_BH1
6
2
2
1
Download