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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
1
DNase-seq
Assay category
64
DNA binding
1
DNA accessibility
Target of assay
47
transcription factor
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
7
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
187
June, 2019
64
November, 2017
15
August, 2017
November, 2018
9
October, 2019
1
November, 2020
Available data
398
bam
339
bigWig
324
fastq
315
bed narrowPeak
313
bigBed narrowPeak
78
tagAlign
71
bed broadPeak
65
bigBed broadPeak
4
tsv
3
tar
1
bed bed3+
Organism
65
Homo sapiens
Biosample type
58
cell line
7
primary cell
Organ
58
liver
6
brain
4
epithelium
4
vasculature
2
blood vessel
1
connective tissue
Project
65
AMP
Genome assembly (visualization)
65
hg19
51
GRCh38
Lab
65
AMP-T2D consortium
Audit category:
13
inconsistent control read length
month_released!
November, 2018
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
DNase-seq
cell line
HepG2
58
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
osteoblast
1
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