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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
10
MeRIP-seq
8
ATAC-seq
4
total RNA-seq
1
DNase-seq
Assay category
15
DNA binding
9
DNA accessibility
4
Transcription
Target of assay
12
histone
12
histone modification
10
broad histone mark
8
control
5
nucleotide modification
2
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
28
December, 2018
25
February, 2020
23
January, 2019
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
20
bam
18
bigWig
16
fastq
14
tagAlign
13
bed narrowPeak
7
bigBed narrowPeak
5
bed broadPeak
4
tsv
1
bed bed3+
1
bigBed broadPeak
Organism
38
Homo sapiens
Biosample type
26
tissue
6
cell line
6
primary cell
Organ
16
brain
15
pancreas
7
connective tissue
6
epithelium
1
adipose tissue
spleen
Project
38
AMP
Genome assembly (visualization)
19
GRCh38
18
hg19
Lab
27
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
Audit category:
4
missing controlled_by
organ_slims!
spleen
BIOSAMPLE
ASSAY
38 results
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Clear Filters
ChIP-seq
MeRIP-seq
ATAC-seq
total RNA-seq
DNase-seq
tissue
brain
15
islet of Langerhans
4
1
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
cell line
EndoC_BH1
6
primary cell
osteoblast
1
4
1
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