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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
2
ATAC-seq
1
Hi-C
Assay category
7
DNA binding
2
DNA accessibility
1
3D chromatin structure
Target of assay
5
histone
5
histone modification
4
broad histone mark
2
control
1
narrow histone mark
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
59
September, 2018
59
September, 2020
48
February, 2021
48
July, 2018
43
April, 2018
40
August, 2017
24
July, 2019
10
October, 2019
8
January, 2021
7
August, 2020
7
June, 2019
5
December, 2019
5
November, 2020
4
August, 2021
3
August, 2018
3
June, 2018
3
November, 2017
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
22
bam
15
bed narrowPeak
15
bigWig
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
hic
1
tar
Organism
10
Homo sapiens
Biosample type
191
tissue
10
primary cell
8
cell line
6
in vitro differentiated cells
Organ
20
epithelium
kidney
8
blood vessel
8
vasculature
8
vein
1
liver
Project
10
AMP
Genome assembly (visualization)
5
hg19
2
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
files.file_type!
bigBed narrowPeak
organ_slims!
kidney
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
primary cell
endothelial cell of umbilical vein
7
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
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